STRINGSTRING
RSAG_04620 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_04620" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_04620Uncharacterized protein (726 aa)    
Predicted Functional Partners:
RSAG_02602
Uncharacterized protein (616 aa)
 
          0.958
RSAG_02604
Uncharacterized protein (271 aa)
 
     
  0.931
RSAG_00227
Diguanylate cyclase (GGDEF) domain-containing protein (659 aa)
0.927
RSAG_04618
Uncharacterized protein (985 aa)
 
       
0.897
RSAG_01994
Uncharacterized protein (222 aa)
 
  0.886
RSAG_01816
Uncharacterized protein (224 aa)
  0.884
RSAG_01249
Uncharacterized protein (234 aa)
  0.876
RSAG_00750
Stage 0 sporulation protein A homolog ; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process (268 aa)
 
  0.861
RSAG_02176
Uncharacterized protein (230 aa)
0.853
RSAG_00716
Uncharacterized protein (222 aa)
 
0.847
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (7%) [HD]