STRINGSTRING
RSAG_02607 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02607" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02607Uncharacterized protein (152 aa)    
Predicted Functional Partners:
RSAG_02606
No annotation available (30 aa)
              0.859
RSAG_01418
Uncharacterized protein (449 aa)
   
 
  0.664
RSAG_01273
TIGR04100 family radical SAM enzyme (201 aa)
   
 
  0.664
RSAG_01355
Uncharacterized protein (1517 aa)
   
   
  0.637
RSAG_02605
MATE efflux family protein (449 aa)
              0.614
RSAG_03175
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (333 aa)
         
  0.607
RSAG_00193
Uncharacterized protein (397 aa)
         
  0.607
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
   
   
  0.531
RSAG_04769
Uncharacterized protein (192 aa)
       
    0.515
RSAG_00212
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
         
  0.453
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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