STRINGSTRING
RSAG_02649 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02649" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02649Uncharacterized protein (327 aa)    
Predicted Functional Partners:
RSAG_03249
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (442 aa)
     
  0.961
RSAG_02648
DnaD and phage-associated domain-containing protein (360 aa)
 
   
  0.953
RSAG_02650
Ribose-phosphate diphosphokinase (395 aa)
              0.914
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
     
 
  0.786
RSAG_02404
Uncharacterized protein (170 aa)
   
          0.729
murC
UDP-N-acetylmuramoyl-L-alanine synthetase ; Cell wall formation (467 aa)
 
          0.727
RSAG_01228
DNA polymerase I (849 aa)
   
   
  0.702
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (598 aa)
       
  0.655
RSAG_02766
Uncharacterized protein (234 aa)
       
  0.643
RSAG_00538
Uncharacterized protein (227 aa)
       
  0.643
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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