STRINGSTRING
RSAG_02701 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02701" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02701Uncharacterized protein (254 aa)    
Predicted Functional Partners:
RSAG_02699
RNA polymerase sigma factor (168 aa)
 
          0.934
RSAG_02700
Uncharacterized protein (164 aa)
              0.859
RSAG_02654
Uncharacterized protein (801 aa)
   
          0.628
RSAG_02108
Uncharacterized protein (195 aa)
   
          0.538
RSAG_00162
Uncharacterized protein (299 aa)
   
          0.531
RSAG_01150
Uncharacterized protein (217 aa)
   
          0.520
RSAG_01149
Uncharacterized protein (379 aa)
   
          0.489
RSAG_00717
Uncharacterized protein (227 aa)
   
          0.471
RSAG_02691
Uncharacterized protein (232 aa)
   
          0.420
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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