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RSAG_02754 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02754" - Alpha-N-arabinofuranosidase 2 in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02754Alpha-N-arabinofuranosidase 2 (112 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase ; Catalyzes the conversion of L-arabinose to L-ribulose (499 aa)
 
   
  0.912
RSAG_02752
Uncharacterized protein (100 aa)
 
          0.903
RSAG_02418
Lactase (1060 aa)
     
 
    0.682
RSAG_01952
Lactase (1013 aa)
     
 
    0.682
RSAG_00417
Lactase (1012 aa)
     
 
    0.682
RSAG_02070
Uncharacterized protein (823 aa)
   
 
    0.656
RSAG_01960
Uncharacterized protein (806 aa)
     
 
    0.610
RSAG_01527
Uncharacterized protein (412 aa)
     
 
    0.610
RSAG_02750
Uncharacterized protein (95 aa)
 
        0.515
RSAG_02749
Uncharacterized protein (307 aa)
 
          0.502
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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