STRINGSTRING
RSAG_02787 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02787" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02787Uncharacterized protein (80 aa)    
Predicted Functional Partners:
RSAG_02786
Heavy metal translocating P-type ATPase (621 aa)
 
  0.975
RSAG_00070
Heavy metal translocating P-type ATPase (621 aa)
 
  0.950
RSAG_00561
Heavy metal translocating P-type ATPase (784 aa)
   
  0.907
RSAG_00158
Heavy metal translocating P-type ATPase (884 aa)
   
  0.904
RSAG_00067
Heavy metal translocating P-type ATPase (698 aa)
   
  0.904
RSAG_02785
Uncharacterized protein (120 aa)
              0.651
RSAG_02788
MATE efflux family protein (451 aa)
              0.503
RSAG_04541
Oligopeptide/dipeptide ABC transporter, ATP-binding protein (345 aa)
              0.502
RSAG_03416
Uncharacterized protein (244 aa)
         
  0.438
RSAG_04531
Uncharacterized protein (227 aa)
         
  0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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