STRINGSTRING
RSAG_02878 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02878" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02878Uncharacterized protein (240 aa)    
Predicted Functional Partners:
RSAG_02877
Uncharacterized protein (444 aa)
   
  0.996
RSAG_02880
No annotation available (80 aa)
              0.859
RSAG_02879
Uncharacterized protein (160 aa)
              0.859
RSAG_02881
Uncharacterized protein (488 aa)
              0.637
RSAG_02876
Uncharacterized protein (295 aa)
              0.439
prfA
Peptide chain release factor 1 ; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (358 aa)
              0.438
RSAG_02370
UDP-N-acetylmuramyl-tripeptide synthetase (491 aa)
   
   
  0.434
prmC
Protein-glutamine N-methyltransferase PrmC ; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (321 aa)
              0.430
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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