STRINGSTRING
RSAG_02909 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02909" - Cof-like hydrolase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02909Cof-like hydrolase (264 aa)    
Predicted Functional Partners:
RSAG_00700
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (375 aa)
   
 
    0.821
pgi
Phosphohexose isomerase (527 aa)
   
 
  0.791
RSAG_02800
Uncharacterized protein (459 aa)
 
 
  0.764
RSAG_00383
Uncharacterized protein (962 aa)
     
  0.738
RSAG_02638
Uncharacterized protein (360 aa)
 
 
    0.732
RSAG_01022
Uncharacterized protein (355 aa)
     
  0.728
RSAG_01019
Uncharacterized protein (377 aa)
     
  0.728
RSAG_00388
Uncharacterized protein (368 aa)
     
  0.728
RSAG_01310
Cof-like hydrolase (269 aa)
   
          0.720
RSAG_01903
Uncharacterized protein (186 aa)
 
 
    0.710
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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