STRINGSTRING
RSAG_02917 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02917" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02917Uncharacterized protein (290 aa)    
Predicted Functional Partners:
RSAG_02920
Cell division protein FtsX ; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation (301 aa)
              0.594
RSAG_02919
Cell division ATP-binding protein FtsE (227 aa)
              0.594
RSAG_02921
C-terminal processing peptidase (396 aa)
              0.554
RSAG_02918
Uncharacterized protein (362 aa)
              0.536
RSAG_02916
Uncharacterized protein (121 aa)
              0.526
RSAG_00513
Aspartyl-tRNA synthetase (598 aa)
 
          0.503
RSAG_02915
OPT family oligopeptide transporter (632 aa)
              0.481
RSAG_03270
Poly(A) polymerase (441 aa)
              0.438
RSAG_02632
Uncharacterized protein (279 aa)
              0.438
RSAG_02631
Uncharacterized protein (312 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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