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RSAG_02922 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02922" - DegV family EDD domain-containing protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02922DegV family EDD domain-containing protein (289 aa)    
Predicted Functional Partners:
RSAG_00924
DAK2 domain fusion protein YloV (548 aa)
        0.959
RSAG_00925
Uncharacterized protein (126 aa)
 
          0.782
RSAG_02923
Uncharacterized protein (652 aa)
              0.632
RSAG_00087
Uncharacterized protein (395 aa)
 
          0.532
RSAG_02921
C-terminal processing peptidase (396 aa)
              0.518
RSAG_02151
DNA polymerase III, delta subunit (328 aa)
   
        0.476
tpiA
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (249 aa)
       
    0.471
pgk
Phosphoglycerate kinase (397 aa)
       
    0.470
RSAG_02156
Uncharacterized protein (749 aa)
   
        0.451
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (119 aa)
   
        0.447
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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