STRINGSTRING
RSAG_02943 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02943" - UPF0297 protein RSAG_02943 in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02943UPF0297 protein RSAG_02943 (93 aa)    
Predicted Functional Partners:
RSAG_02944
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)
 
          0.903
RSAG_02945
Uncharacterized protein (85 aa)
              0.858
RSAG_03072
Uncharacterized protein (235 aa)
   
          0.731
RSAG_02946
Uncharacterized protein (582 aa)
              0.699
RSAG_02942
MiaB-like tRNA modifying enzyme (422 aa)
              0.691
RSAG_01196
UPF0122 protein RSAG_01196 ; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein (107 aa)
   
     
  0.690
RSAG_03242
Uncharacterized protein (63 aa)
   
          0.689
RSAG_02950
Uncharacterized protein (410 aa)
 
          0.676
RSAG_01086
Uncharacterized protein (581 aa)
   
          0.646
RSAG_02949
Uncharacterized protein (214 aa)
              0.627
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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