STRINGSTRING
RSAG_02946 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02946" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02946Uncharacterized protein (582 aa)    
Predicted Functional Partners:
RSAG_02947
Uncharacterized protein (114 aa)
              0.864
rnpA
Protein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (123 aa)
       
  0.804
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (697 aa)
   
 
  0.800
RSAG_02950
Uncharacterized protein (410 aa)
         
  0.785
RSAG_02944
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)
 
          0.757
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (302 aa)
     
 
  0.731
RSAG_02949
Uncharacterized protein (214 aa)
              0.728
RSAG_02948
Uncharacterized protein (134 aa)
              0.728
RSAG_02945
Uncharacterized protein (85 aa)
              0.708
RSAG_02943
UPF0297 protein RSAG_02943 (93 aa)
              0.699
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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