STRINGSTRING
RSAG_02947 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02947" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02947Uncharacterized protein (114 aa)    
Predicted Functional Partners:
RSAG_02946
Uncharacterized protein (582 aa)
              0.864
RSAG_02948
Uncharacterized protein (134 aa)
              0.627
RSAG_02949
Uncharacterized protein (214 aa)
              0.626
RSAG_02950
Uncharacterized protein (410 aa)
              0.625
RSAG_02945
Uncharacterized protein (85 aa)
              0.541
RSAG_02944
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)
              0.523
RSAG_02943
UPF0297 protein RSAG_02943 (93 aa)
              0.523
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (9%) [HD]