STRINGSTRING
RSAG_02959 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02959" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02959Uncharacterized protein (440 aa)    
Predicted Functional Partners:
RSAG_02960
No annotation available (56 aa)
              0.703
RSAG_01337
Uncharacterized protein (398 aa)
   
          0.621
RSAG_02483
Uncharacterized protein (78 aa)
   
          0.507
RSAG_02823
Uncharacterized protein (564 aa)
 
          0.470
RSAG_03483
Uncharacterized protein (417 aa)
   
          0.469
RSAG_02962
Uncharacterized protein (417 aa)
   
          0.466
RSAG_02481
Uncharacterized protein (80 aa)
   
          0.440
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (251 aa)
              0.438
RSAG_02958
Uncharacterized protein (95 aa)
              0.426
RSAG_01246
Uncharacterized protein (566 aa)
 
          0.407
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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