STRINGSTRING
RSAG_02991 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02991" - Formate/nitrite transporter in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02991Formate/nitrite transporter (251 aa)    
Predicted Functional Partners:
RSAG_02990
DNA topoisomerase (726 aa)
              0.859
RSAG_02989
Uncharacterized protein (223 aa)
              0.662
RSAG_02172
Formate dehydrogenase, alpha subunit (902 aa)
 
          0.575
selD
Selenophosphate synthase ; Synthesizes selenophosphate from selenide and ATP (345 aa)
              0.478
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
   
        0.453
RSAG_02173
Uncharacterized protein (625 aa)
         
  0.448
RSAG_00048
Uncharacterized protein (623 aa)
         
  0.448
RSAG_02897
Uncharacterized protein (671 aa)
   
        0.447
RSAG_02378
Uncharacterized protein (727 aa)
   
        0.447
RSAG_02377
Uncharacterized protein (248 aa)
   
        0.447
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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