STRINGSTRING
RSAG_02998 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_02998" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_02998Uncharacterized protein (226 aa)    
Predicted Functional Partners:
RSAG_02997
Phosphatidylserine decarboxylase (304 aa)
 
 
  0.985
mprF
Uncharacterized protein ; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host’s immune system (defensins, cathelicidins) and by the competing microorganisms (343 aa)
 
          0.954
RSAG_03083
Phosphatidate cytidylyltransferase (264 aa)
   
 
  0.861
RSAG_01080
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (179 aa)
   
 
  0.806
RSAG_01855
Inosine-5’-monophosphate dehydrogenase (485 aa)
       
    0.768
RSAG_01565
Phosphoserine phosphatase/homoserine phosphotransferase (200 aa)
       
    0.752
RSAG_02217
Uncharacterized protein ; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (519 aa)
     
  0.739
RSAG_01069
Uncharacterized protein ; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (510 aa)
     
  0.739
RSAG_03284
1-acyl-sn-glycerol-3-phosphate acyltransferase (237 aa)
 
 
  0.736
trpF
N-(5’-phosphoribosyl)anthranilate isomerase (212 aa)
       
    0.721
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (7%) [HD]