STRINGSTRING
RSAG_03001 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03001" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03001Uncharacterized protein (264 aa)    
Predicted Functional Partners:
RSAG_03000
Uncharacterized protein (255 aa)
 
 
  0.994
RSAG_02096
Uncharacterized protein (353 aa)
 
 
  0.950
RSAG_03513
Uncharacterized protein (126 aa)
 
 
  0.949
RSAG_00606
Uncharacterized protein (338 aa)
   
 
  0.786
RSAG_00604
Uncharacterized protein (195 aa)
   
 
  0.779
RSAG_01699
Hydroxyethylthiazole kinase ; Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) (258 aa)
 
          0.505
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
              0.441
RSAG_03021
TIGR00370 family protein (252 aa)
              0.438
RSAG_03020
Uncharacterized protein (348 aa)
              0.438
RSAG_02729
Thiamine-phosphate pyrophosphorylase (198 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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