STRINGSTRING
RSAG_03008 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03008" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03008Uncharacterized protein (229 aa)    
Predicted Functional Partners:
RSAG_03304
Uncharacterized protein (788 aa)
   
          0.699
RSAG_01898
Uncharacterized protein (353 aa)
   
          0.621
RSAG_00848
Uncharacterized protein (661 aa)
   
          0.591
RSAG_03006
Uncharacterized protein (340 aa)
              0.536
RSAG_02677
Uncharacterized protein (329 aa)
   
          0.529
RSAG_02132
Uncharacterized protein (846 aa)
   
          0.521
RSAG_02641
Uncharacterized protein (347 aa)
   
          0.509
RSAG_00105
Uncharacterized protein (285 aa)
   
          0.489
RSAG_01550
No annotation available (81 aa)
   
          0.464
RSAG_00228
Uncharacterized protein (635 aa)
   
          0.463
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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