STRINGSTRING
RSAG_03009 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03009" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03009Uncharacterized protein (393 aa)    
Predicted Functional Partners:
RSAG_01355
Uncharacterized protein (1517 aa)
   
 
  0.926
RSAG_02461
Uncharacterized protein (467 aa)
   
  0.880
bioB
Biotin synthase ; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism (330 aa)
   
 
  0.871
RSAG_00056
Iron-only hydrogenase maturation rSAM protein HydE (349 aa)
   
 
  0.871
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
       
  0.852
RSAG_01057
Uncharacterized protein (641 aa)
   
 
  0.849
RSAG_01040
Uncharacterized protein (666 aa)
   
 
  0.849
RSAG_00957
Uncharacterized protein (897 aa)
   
 
  0.849
bioD
Dethiobiotin synthase ; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (232 aa)
   
 
  0.803
RSAG_03443
Adenosylmethionine-8-amino-7-oxononanoate transaminase (396 aa)
   
 
  0.791
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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