STRINGSTRING
RSAG_03017 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03017" - UPF0271 protein RSAG_03017 in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03017UPF0271 protein RSAG_03017 (256 aa)    
Predicted Functional Partners:
RSAG_03021
TIGR00370 family protein (252 aa)
   
  0.995
RSAG_03020
Uncharacterized protein (348 aa)
 
 
  0.989
RSAG_03022
Uncharacterized protein (400 aa)
 
   
  0.885
RSAG_03018
Acetyl-CoA carboxylase, biotin carboxylase subunit (449 aa)
   
        0.803
RSAG_03019
Acetyl-CoA carboxylase, biotin carboxyl carrier protein (145 aa)
   
        0.753
RSAG_00776
Acetyl-CoA carboxylase, biotin carboxylase subunit (448 aa)
   
        0.513
RSAG_00377
Citrate synthase (453 aa)
     
        0.473
RSAG_00085
Citrate synthase (466 aa)
     
        0.473
RSAG_01036
Uncharacterized protein (122 aa)
   
        0.443
RSAG_00778
Acetyl-CoA carboxylase, biotin carboxyl carrier protein (153 aa)
   
        0.443
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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