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rimP protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"rimP" - Ribosome maturation factor RimP in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rimPRibosome maturation factor RimP ; Required for maturation of 30S ribosomal subunits (154 aa)    
Predicted Functional Partners:
nusA
Transcription termination/antitermination protein NusA ; Participates in both transcription termination and antitermination (406 aa)
 
        0.971
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (941 aa)
   
        0.887
RSAG_03046
Uncharacterized protein (91 aa)
   
   
  0.859
RSAG_03045
Uncharacterized protein (112 aa)
 
          0.854
rbfA
Ribosome-binding factor A ; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (131 aa)
   
      0.735
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (295 aa)
   
   
  0.701
RSAG_03042
Uncharacterized protein (320 aa)
   
        0.683
RSAG_03040
Riboflavin biosynthesis protein (299 aa)
              0.671
rpsO
30S ribosomal protein S15 ; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (88 aa)
   
   
  0.656
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (441 aa)
   
 
  0.554
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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