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pyrB protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"pyrB" - Aspartate transcarbamylase in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate transcarbamylase (303 aa)    
Predicted Functional Partners:
RSAG_03069
Aspartate carbamoyltransferase, regulatory subunit (145 aa)
 
  0.999
pyrC
Dihydroorotase (428 aa)
 
  0.999
carA
Carbamoyl-phosphate synthetase glutamine chain (358 aa)
  0.999
RSAG_02104
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (1071 aa)
  0.999
RSAG_02887
Phosphoribosylformylglycinamidine synthase (1254 aa)
 
 
  0.998
RSAG_01299
Dihydropyrimidinase (461 aa)
 
  0.995
pyrD
Dihydroorotate dehydrogenase ; Catalyzes the conversion of dihydroorotate to orotate (300 aa)
 
 
  0.990
pyrF
OMP decarboxylase (308 aa)
 
 
  0.958
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
   
   
  0.941
pyrK
Dihydroorotate oxidase B, electron transfer subunit ; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+) (262 aa)
 
 
  0.904
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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