STRINGSTRING
RSAG_03107 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03107" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03107Uncharacterized protein (124 aa)    
Predicted Functional Partners:
RSAG_01213
Phosphate acetyltransferase (343 aa)
       
  0.760
RSAG_01945
Uncharacterized protein (480 aa)
       
    0.740
RSAG_00252
Aldehyde dehydrogenase (459 aa)
       
    0.740
RSAG_03104
Uncharacterized protein (156 aa)
   
   
    0.687
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A ; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) (489 aa)
       
  0.621
RSAG_02465
NAD+ synthetase (638 aa)
       
    0.618
RSAG_03396
N-carbamoylputrescine amidase (292 aa)
       
    0.616
RSAG_02970
Uncharacterized protein (306 aa)
       
    0.616
RSAG_01984
Uncharacterized protein (269 aa)
       
    0.616
RSAG_02567
Acetolactate synthase (572 aa)
     
 
  0.615
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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