STRINGSTRING
RSAG_03114 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03114" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03114Uncharacterized protein (316 aa)    
Predicted Functional Partners:
RSAG_03115
Uncharacterized protein (382 aa)
 
          0.932
RSAG_03030
Uncharacterized protein (184 aa)
   
          0.708
RSAG_01561
Uncharacterized protein (335 aa)
 
          0.614
pth
Peptidyl-tRNA hydrolase ; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (193 aa)
              0.537
RSAG_02656
Uncharacterized protein (813 aa)
   
          0.519
RSAG_00847
Uncharacterized protein (409 aa)
   
          0.432
RSAG_02137
Uncharacterized protein (365 aa)
   
          0.427
mfd
Transcription-repair-coupling factor ; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1107 aa)
              0.406
RSAG_01665
Glucose-1-phosphate adenylyltransferase, GlgD subunit (371 aa)
   
          0.403
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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