STRINGSTRING
RSAG_03117 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03117" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03117Uncharacterized protein (79 aa)    
Predicted Functional Partners:
RSAG_03116
No annotation available (60 aa)
              0.775
RSAG_02627
Uncharacterized protein (234 aa)
   
          0.719
RSAG_00263
Uncharacterized protein (225 aa)
   
          0.641
RSAG_02677
Uncharacterized protein (329 aa)
   
          0.568
RSAG_02658
Uncharacterized protein (122 aa)
   
          0.550
RSAG_00603
Uncharacterized protein (329 aa)
   
          0.540
RSAG_01890
Uncharacterized protein (418 aa)
   
          0.535
RSAG_02652
Uncharacterized protein (350 aa)
   
          0.534
RSAG_02386
Uncharacterized protein (170 aa)
   
          0.528
RSAG_02138
Uncharacterized protein (144 aa)
   
          0.510
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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