STRINGSTRING
RSAG_03124 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03124" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03124Uncharacterized protein (151 aa)    
Predicted Functional Partners:
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (273 aa)
              0.729
RSAG_02221
Uncharacterized protein (208 aa)
   
          0.638
RSAG_03131
Uncharacterized protein (516 aa)
 
          0.623
ispE
4-(cytidine-5’-diphospho)-2-C-methyl-D-erythritol kinase ; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (292 aa)
              0.569
RSAG_03132
Uncharacterized protein (128 aa)
 
          0.554
RSAG_02404
Uncharacterized protein (170 aa)
   
          0.542
RSAG_03126
Uncharacterized protein (91 aa)
              0.536
RSAG_03129
Uncharacterized protein (239 aa)
 
          0.524
RSAG_00930
Uncharacterized protein (103 aa)
   
          0.492
RSAG_02668
Uncharacterized protein (296 aa)
   
          0.487
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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