STRINGSTRING
RSAG_03129 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03129" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03129Uncharacterized protein (239 aa)    
Predicted Functional Partners:
ispE
4-(cytidine-5’-diphospho)-2-C-methyl-D-erythritol kinase ; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (292 aa)
              0.879
RSAG_03341
Uncharacterized protein (245 aa)
   
   
  0.773
RSAG_03131
Uncharacterized protein (516 aa)
              0.709
RSAG_01546
Uncharacterized protein (244 aa)
   
   
  0.649
RSAG_01560
TRAP transporter, DctM subunit (1110 aa)
 
          0.620
RSAG_03128
Uncharacterized protein (516 aa)
              0.586
RSAG_03127
Uncharacterized protein (561 aa)
              0.566
RSAG_03124
Uncharacterized protein (151 aa)
 
          0.524
RSAG_03132
Uncharacterized protein (128 aa)
              0.500
RSAG_01400
Uncharacterized protein (752 aa)
   
        0.449
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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