STRINGSTRING
RSAG_03150 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03150" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03150Uncharacterized protein (319 aa)    
Predicted Functional Partners:
RSAG_03149
HipA domain-containing protein (69 aa)
 
          0.968
RSAG_03148
Y4mF family transcriptional regulator (69 aa)
 
          0.818
RSAG_04663
Uncharacterized protein (170 aa)
     
 
  0.705
RSAG_03151
Uncharacterized protein (73 aa)
              0.689
RSAG_02525
Uncharacterized protein (92 aa)
 
          0.508
RSAG_02524
HipA domain-containing protein (376 aa)
 
     
  0.504
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (10%) [HD]