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RSAG_03172 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03172" - tRNA-dihydrouridine synthase in Ruminococcus sp. 5139BFAA
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
RSAG_03172tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (321 aa)    
Predicted Functional Partners:
RSAG_03173
Uncharacterized protein (121 aa)
              0.820
RSAG_03174
Biotin-[acetyl-CoA-carboxylase] ligase (267 aa)
              0.761
RSAG_03175
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (333 aa)
              0.728
RSAG_03171
Transcript cleavage factor GreA ; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (160 aa)
   
        0.699
RSAG_01228
DNA polymerase I (849 aa)
 
   
  0.691
RSAG_03179
Uncharacterized protein (217 aa)
              0.690
RSAG_03178
Uncharacterized protein (257 aa)
   
   
  0.560
RSAG_03176
Uncharacterized protein (313 aa)
   
        0.549
tsaD
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (339 aa)
 
        0.547
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
   
   
  0.539
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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