STRINGSTRING
RSAG_03177 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03177" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03177Uncharacterized protein (144 aa)    
Predicted Functional Partners:
RSAG_03176
Uncharacterized protein (313 aa)
 
          0.980
RSAG_03178
Uncharacterized protein (257 aa)
              0.802
RSAG_03179
Uncharacterized protein (217 aa)
              0.786
RSAG_03174
Biotin-[acetyl-CoA-carboxylase] ligase (267 aa)
              0.744
RSAG_03175
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (333 aa)
              0.744
RSAG_01932
Protein HflC ; HflC and HflK could regulate a protease (288 aa)
 
          0.743
RSAG_03173
Uncharacterized protein (121 aa)
              0.638
RSAG_01933
HflK protein (347 aa)
 
          0.590
RSAG_03180
TrkH family potassium uptake protein (460 aa)
              0.579
pfkA
Phosphohexokinase ; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (337 aa)
              0.555
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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