STRINGSTRING
RSAG_03183 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03183" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03183Uncharacterized protein (279 aa)    
Predicted Functional Partners:
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (119 aa)
            0.847
RSAG_03182
DNA-directed DNA polymerase (1155 aa)
              0.701
aroB
3-dehydroquinate synthase (363 aa)
       
    0.599
pfkA
Phosphohexokinase ; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (337 aa)
              0.556
RSAG_03180
TrkH family potassium uptake protein (460 aa)
   
        0.525
RSAG_00214
Uncharacterized protein (546 aa)
   
   
  0.507
RSAG_00234
No annotation available (323 aa)
 
          0.505
RSAG_03185
Uncharacterized protein (410 aa)
              0.476
RSAG_03184
Uncharacterized protein (272 aa)
              0.476
RSAG_03220
Uncharacterized protein (312 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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