STRINGSTRING
RSAG_03193 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03193" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03193Uncharacterized protein (424 aa)    
Predicted Functional Partners:
pgi
Phosphohexose isomerase (527 aa)
     
    0.798
RSAG_00350
Uncharacterized protein (324 aa)
       
    0.767
RSAG_01001
Uncharacterized protein (438 aa)
 
   
    0.669
RSAG_01949
Uncharacterized protein (337 aa)
       
    0.624
RSAG_01943
Uncharacterized protein (370 aa)
       
    0.624
RSAG_01544
Uncharacterized protein (358 aa)
       
    0.624
RSAG_02737
N-acetylneuraminate lyase (304 aa)
       
    0.624
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (297 aa)
       
    0.624
RSAG_04684
Mannose-6-phosphate isomerase, class I (332 aa)
       
    0.622
RSAG_00979
Uncharacterized protein (117 aa)
       
    0.622
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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