STRINGSTRING
RSAG_03209 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03209" - SpoIID/LytB domain-containing protein in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
RSAG_03209SpoIID/LytB domain-containing protein (277 aa)    
Predicted Functional Partners:
RSAG_02759
No annotation available (50 aa)
 
     
  0.805
RSAG_00836
RNA polymerase sigma factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (238 aa)
   
     
  0.803
gpr
Spore protease ; Initiates the rapid degradation of small, acid-soluble proteins during spore germination (304 aa)
   
     
  0.757
RSAG_03208
Uncharacterized protein (241 aa)
 
          0.749
RSAG_00750
Stage 0 sporulation protein A homolog ; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process (268 aa)
   
 
 
  0.719
RSAG_00050
Stage IV sporulation protein A (489 aa)
   
     
  0.708
RSAG_00751
Stage IV sporulation protein B (409 aa)
   
     
  0.698
RSAG_02951
RNA polymerase sigma factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (209 aa)
   
     
  0.672
RSAG_02836
Stage V sporulation protein AC (154 aa)
   
          0.580
RSAG_02830
Anti-sigma F factor (153 aa)
   
     
  0.568
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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