STRINGSTRING
RSAG_03220 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03220" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03220Uncharacterized protein (312 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase (363 aa)
     
    0.777
RSAG_00583
Uncharacterized protein (261 aa)
 
   
  0.725
RSAG_00177
Uncharacterized protein (878 aa)
   
 
 
  0.689
ruvA
Holliday junction ATP-dependent DNA helicase RuvA ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (202 aa)
 
 
  0.668
RSAG_03433
Uncharacterized protein (228 aa)
 
   
  0.664
ruvB
Holliday junction ATP-dependent DNA helicase RuvB ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (334 aa)
 
 
  0.657
RSAG_00333
Uncharacterized protein (275 aa)
 
   
  0.622
RSAG_03322
Uncharacterized protein (255 aa)
 
   
  0.616
RSAG_00446
Uncharacterized protein (325 aa)
 
 
 
  0.606
RSAG_03201
Uncharacterized protein (262 aa)
 
   
  0.589
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (11%) [HD]