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RSAG_03240 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03240" - SrtB family sortase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03240SrtB family sortase (270 aa)    
Predicted Functional Partners:
RSAG_03239
Uncharacterized protein (521 aa)
              0.578
cobB
Regulatory protein SIR2 homolog ; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form (240 aa)
              0.575
RSAG_00784
X-X-X-Leu-X-X-Gly heptad repeat protein (1004 aa)
   
          0.513
RSAG_03242
Uncharacterized protein (63 aa)
              0.476
RSAG_03238
Uncharacterized protein (412 aa)
 
          0.455
RSAG_03333
Uncharacterized protein (248 aa)
   
          0.449
RSAG_00785
Uncharacterized protein (696 aa)
   
          0.426
RSAG_00986
Uncharacterized protein (206 aa)
   
          0.425
RSAG_00925
Uncharacterized protein (126 aa)
 
          0.410
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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