STRINGSTRING
RSAG_03242 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03242" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03242Uncharacterized protein (63 aa)    
Predicted Functional Partners:
rpsF
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (110 aa)
              0.732
RSAG_03046
Uncharacterized protein (91 aa)
   
          0.693
RSAG_02943
UPF0297 protein RSAG_02943 (93 aa)
   
          0.689
RSAG_03244
Single-stranded DNA-binding protein (153 aa)
              0.688
cobB
Regulatory protein SIR2 homolog ; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form (240 aa)
              0.682
rsmG
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (236 aa)
 
          0.659
rpsR
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (87 aa)
              0.653
rplI
50S ribosomal protein L9 ; Binds to the 23S rRNA (148 aa)
              0.591
RSAG_02630
Uncharacterized protein (184 aa)
 
          0.547
RSAG_03247
Uncharacterized protein (683 aa)
 
          0.484
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (8%) [HD]