STRINGSTRING
RSAG_03244 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03244" - Single-stranded DNA-binding protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03244Single-stranded DNA-binding protein (153 aa)    
Predicted Functional Partners:
RSAG_03182
DNA-directed DNA polymerase (1155 aa)
   
 
  0.985
rpsR
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (87 aa)
   
   
  0.932
rpsF
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (110 aa)
   
   
  0.915
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (598 aa)
   
 
 
  0.899
RSAG_02637
DNA polymerase III, subunit gamma and tau (539 aa)
   
 
  0.875
priA
ATP-dependent helicase PriA ; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (739 aa)
       
 
  0.872
RSAG_03249
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (442 aa)
 
   
  0.867
RSAG_03291
DNA polymerase III, delta’ subunit (329 aa)
     
 
  0.848
rplI
50S ribosomal protein L9 ; Binds to the 23S rRNA (148 aa)
 
   
  0.781
rpsD
30S ribosomal protein S4 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (197 aa)
   
   
  0.775
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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