STRINGSTRING
RSAG_03247 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03247" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03247Uncharacterized protein (683 aa)    
Predicted Functional Partners:
rplI
50S ribosomal protein L9 ; Binds to the 23S rRNA (148 aa)
       
  0.964
RSAG_03249
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (442 aa)
 
     
  0.865
RSAG_03246
No annotation available (51 aa)
              0.792
rpsR
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (87 aa)
         
  0.746
RSAG_02135
TIGR00159 family protein (296 aa)
   
     
  0.718
RSAG_03244
Single-stranded DNA-binding protein (153 aa)
              0.696
rpsF
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (110 aa)
              0.630
RSAG_02221
Uncharacterized protein (208 aa)
 
          0.607
RSAG_03042
Uncharacterized protein (320 aa)
   
     
  0.582
RSAG_03072
Uncharacterized protein (235 aa)
   
          0.536
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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