STRINGSTRING
RSAG_03260 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03260" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03260Uncharacterized protein (549 aa)    
Predicted Functional Partners:
RSAG_03258
Uncharacterized protein (264 aa)
 
          0.742
RSAG_03033
Uncharacterized protein (125 aa)
   
          0.728
RSAG_03261
N-acetylmuramoyl-L-alanine amidase CwlD (223 aa)
       
    0.686
RSAG_02674
Uncharacterized protein (348 aa)
   
          0.656
RSAG_04548
Uncharacterized protein (383 aa)
   
          0.619
RSAG_02828
Uncharacterized protein (445 aa)
   
          0.615
RSAG_02157
Uncharacterized protein (313 aa)
   
          0.583
RSAG_03292
Uncharacterized protein (195 aa)
   
          0.560
RSAG_00136
Rod shape-determining protein MreD (176 aa)
   
          0.556
RSAG_00928
Uncharacterized protein (131 aa)
   
          0.554
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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