STRINGSTRING
RSAG_03261 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03261" - N-acetylmuramoyl-L-alanine amidase CwlD in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03261N-acetylmuramoyl-L-alanine amidase CwlD (223 aa)    
Predicted Functional Partners:
RSAG_01493
Uncharacterized protein (337 aa)
   
   
    0.866
RSAG_00528
Uncharacterized protein (254 aa)
 
   
0.835
RSAG_04579
Uncharacterized protein (707 aa)
              0.819
RSAG_03137
Uncharacterized protein (322 aa)
   
   
 
0.801
RSAG_00813
Uncharacterized protein (335 aa)
       
  0.790
RSAG_04563
Uncharacterized protein (453 aa)
       
  0.758
RSAG_01841
Uncharacterized protein (706 aa)
       
  0.758
RSAG_03260
Uncharacterized protein (549 aa)
       
    0.686
RSAG_03131
Uncharacterized protein (516 aa)
 
   
    0.664
RSAG_01494
Uncharacterized protein (366 aa)
   
   
    0.650
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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