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rsmI protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"rsmI" - rRNA in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
rsmIrRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (283 aa)    
Predicted Functional Partners:
RSAG_03291
DNA polymerase III, delta’ subunit (329 aa)
 
        0.863
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
       
    0.815
RSAG_03289
Uncharacterized protein (246 aa)
   
   
  0.780
RSAG_03290
Uncharacterized protein (299 aa)
              0.770
RSAG_03292
Uncharacterized protein (195 aa)
   
   
  0.751
RSAG_03293
Uncharacterized protein (468 aa)
              0.741
RSAG_02385
rRNA (cytosine-N(4)-)-methyltransferase RsmH ; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (311 aa)
 
   
  0.700
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (290 aa)
   
   
  0.680
rsmG
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (236 aa)
 
   
  0.672
RSAG_01244
Siroheme synthase domain-containing protein (165 aa)
       
    0.672
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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