STRINGSTRING
RSAG_03289 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03289" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03289Uncharacterized protein (246 aa)    
Predicted Functional Partners:
RSAG_03291
DNA polymerase III, delta’ subunit (329 aa)
              0.914
RSAG_03290
Uncharacterized protein (299 aa)
              0.879
RSAG_03204
Uncharacterized protein (91 aa)
            0.866
RSAG_03293
Uncharacterized protein (468 aa)
              0.802
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (283 aa)
   
   
  0.780
RSAG_04661
UPF0348 protein RSAG_04661 (419 aa)
 
          0.747
RSAG_03292
Uncharacterized protein (195 aa)
              0.742
RSAG_02468
Uncharacterized protein (270 aa)
   
    0.725
RSAG_03009
Uncharacterized protein (393 aa)
     
    0.649
RSAG_02657
Uncharacterized protein (387 aa)
     
    0.649
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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