STRINGSTRING
RSAG_03298 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03298" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03298Uncharacterized protein (196 aa)    
Predicted Functional Partners:
RSAG_03299
Uncharacterized protein (556 aa)
              0.792
RSAG_03297
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (170 aa)
              0.744
RSAG_01333
Uncharacterized protein (125 aa)
       
  0.725
RSAG_01322
Uncharacterized protein (125 aa)
       
  0.725
RSAG_00987
Uncharacterized protein (125 aa)
       
  0.725
RSAG_00982
Uncharacterized protein (127 aa)
       
  0.725
RSAG_03300
Uncharacterized protein (302 aa)
              0.715
RSAG_02222
Cob(I)yrinic acid a,c-diamide adenosyltransferase (166 aa)
   
   
    0.659
RSAG_00688
Uncharacterized protein (173 aa)
       
    0.621
pyrD
Dihydroorotate dehydrogenase ; Catalyzes the conversion of dihydroorotate to orotate (300 aa)
       
    0.615
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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