STRINGSTRING
RSAG_03320 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03320" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03320Uncharacterized protein (539 aa)    
Predicted Functional Partners:
RSAG_03319
Uncharacterized protein (494 aa)
 
          0.924
RSAG_03318
Uncharacterized protein (287 aa)
 
          0.908
RSAG_00508
Uncharacterized protein (673 aa)
   
          0.703
RSAG_01078
Uncharacterized protein (90 aa)
   
          0.701
RSAG_00532
Uncharacterized protein (316 aa)
   
          0.701
RSAG_03317
Uncharacterized protein (357 aa)
 
          0.650
RSAG_00461
Uncharacterized protein (432 aa)
   
          0.638
RSAG_01856
Uncharacterized protein (167 aa)
   
          0.623
RSAG_00907
Uncharacterized protein (309 aa)
   
          0.609
RSAG_02446
IS605 OrfB family transposase (184 aa)
   
          0.590
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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