STRINGSTRING
RSAG_03333 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03333" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03333Uncharacterized protein (248 aa)    
Predicted Functional Partners:
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
   
 
  0.886
RSAG_00775
Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit (571 aa)
   
 
    0.816
RSAG_01947
Uncharacterized protein (364 aa)
   
 
  0.783
RSAG_02527
Uncharacterized protein (514 aa)
     
  0.716
RSAG_03103
Amino acid adenylation domain-containing protein (491 aa)
   
 
  0.691
RSAG_00947
Amino acid adenylation domain-containing protein (2996 aa)
   
 
  0.691
RSAG_02936
Uncharacterized protein (241 aa)
   
    0.680
RSAG_01904
Uncharacterized protein (166 aa)
 
 
    0.663
RSAG_00595
Uncharacterized protein (255 aa)
   
 
  0.652
RSAG_00843
Adenylosuccinase (479 aa)
   
 
  0.648
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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