STRINGSTRING
RSAG_03335 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03335" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03335Uncharacterized protein (99 aa)    
Predicted Functional Partners:
RSAG_04608
IS605 OrfB family transposase (274 aa)
              0.859
RSAG_02262
Uncharacterized protein (134 aa)
   
          0.777
RSAG_02967
Uncharacterized protein (135 aa)
   
          0.760
RSAG_01325
No annotation available (56 aa)
   
          0.749
RSAG_00428
IS605 OrfB family transposase (442 aa)
 
   
  0.589
RSAG_00469
IS605 OrfB family transposase (442 aa)
 
   
  0.588
RSAG_04614
IS605 OrfB family transposase (317 aa)
   
   
  0.482
RSAG_03500
IS605 OrfB family transposase (362 aa)
   
   
  0.482
RSAG_02969
IS605 OrfB family transposase (314 aa)
   
   
  0.482
RSAG_02263
IS605 OrfB family transposase (379 aa)
   
   
  0.482
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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