STRINGSTRING
RSAG_03348 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03348" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03348Uncharacterized protein (341 aa)    
Predicted Functional Partners:
RSAG_03352
Uncharacterized protein (920 aa)
 
 
  0.990
RSAG_00201
Selenium-dependent molybdenum hydroxylase 1 (860 aa)
 
 
  0.984
RSAG_00197
Uncharacterized protein (166 aa)
 
 
  0.947
RSAG_00241
Uncharacterized protein (155 aa)
 
 
  0.946
RSAG_00199
Uncharacterized protein (757 aa)
 
 
  0.945
RSAG_03350
ModE molybdate transport repressor domain-containing protein (309 aa)
 
          0.945
RSAG_00240
Uncharacterized protein (792 aa)
 
 
  0.934
RSAG_00198
Uncharacterized protein (294 aa)
 
 
  0.914
RSAG_03347
Uncharacterized protein (286 aa)
 
          0.891
RSAG_03353
Uncharacterized protein (764 aa)
 
          0.829
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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