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RSAG_03356 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03356" - C_GCAxxG_C_C family protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03356C_GCAxxG_C_C family protein (143 aa)    
Predicted Functional Partners:
RSAG_03354
Uncharacterized protein (73 aa)
 
          0.972
RSAG_03353
Uncharacterized protein (764 aa)
 
          0.972
RSAG_03357
Uncharacterized protein (465 aa)
 
          0.971
RSAG_03355
Uncharacterized protein (177 aa)
 
          0.970
RSAG_03358
Uncharacterized protein (398 aa)
 
          0.961
RSAG_03352
Uncharacterized protein (920 aa)
 
          0.948
RSAG_03348
Uncharacterized protein (341 aa)
 
          0.807
RSAG_03350
ModE molybdate transport repressor domain-containing protein (309 aa)
 
          0.794
RSAG_03349
Uncharacterized protein (357 aa)
 
          0.699
RSAG_02783
Uncharacterized protein (166 aa)
   
          0.552
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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