STRINGSTRING
RSAG_03372 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03372" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03372Uncharacterized protein (232 aa)    
Predicted Functional Partners:
RSAG_03377
His-Xaa-Ser repeat-associated upstream radical SAM protein (244 aa)
              0.718
RSAG_04606
His-Xaa-Ser repeat-associated downstream radical SAM protein (383 aa)
              0.718
RSAG_03375
Uncharacterized protein (347 aa)
              0.718
RSAG_03374
Uncharacterized protein (74 aa)
              0.718
RSAG_03373
Radical SAM pair-associated protein (115 aa)
              0.718
RSAG_03371
Uncharacterized protein (507 aa)
              0.564
RSAG_03370
Uncharacterized protein (72 aa)
              0.564
RSAG_02771
Uncharacterized protein (579 aa)
   
          0.522
RSAG_03369
Uncharacterized protein (170 aa)
              0.475
RSAG_04604
Uncharacterized protein (226 aa)
   
          0.467
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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