STRINGSTRING
RSAG_03383 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03383" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03383Uncharacterized protein (145 aa)    
Predicted Functional Partners:
RSAG_03382
Uncharacterized protein (653 aa)
              0.606
RSAG_03381
No annotation available (52 aa)
              0.606
glnS
Glutaminyl-tRNA synthetase (555 aa)
       
    0.603
gltX
Glutamyl-tRNA synthetase ; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (487 aa)
       
    0.603
RSAG_03384
Uncharacterized protein (282 aa)
              0.562
RSAG_00172
Sporulation protein YqfD (394 aa)
 
          0.546
ribBA
Riboflavin biosynthesis protein RibBA ; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (399 aa)
   
        0.535
rpsU
30S ribosomal protein S21 (82 aa)
   
   
  0.496
dnaK
Heat shock protein 70 ; Acts as a chaperone (625 aa)
     
      0.488
sigA
RNA polymerase sigma factor SigA ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (375 aa)
   
        0.451
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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